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| − | This page | + | * This page is being used for discussion of BOSC 2009 planning. Please see the [[BOSC_2009|BOSC 2009 Main Page]] for the official information. |
== Important Dates == | == Important Dates == | ||
| − | * | + | NOTE: Dates in '''BOLD''' are determined by ISMB. Dates in ''italics'' are "penciled" in for planning purposes. |
| − | * | + | |
| − | * Abstract deadline | + | * ''Monday, November 10:'' Chair posts SIG proposal to [http://docs.google.com/Doc?docid=ddh98g4s_2dzkf86pp&hl=en Google Site] for comment by organizing committee. |
| − | * Review period | + | * ''Monday, November 17:'' SIG proposal comment period closes so proposal can be finalized. |
| − | * Notification of accepted abstracts | + | * '''Wednesday, November 19, 2008:''' SIG proposals due to ISMB; [[Media:Dahlquist_BOSC2009.pdf|Proposal]] uploaded to ISMB as of 3:06PM PST ''— [[User:Kdahlquist|Kdahlquist]] 23:06, 19 November 2008 (UTC)'' |
| + | * '''Tuesday, December 16, 2008:''' SIG proposal has been accepted by ISMB ''— [[User:Kdahlquist|Kdahlquist]] 22:51, 16 December 2008 (UTC)'' | ||
| + | * ''Friday, January 16, 2009:'' SIG summary due to ISMB coordinators, Instance of OCS set up and tested (or Easy Chair) | ||
| + | * '''February 16, 2009:''' Registration Opens | ||
| + | * '''Wednesday, March 4, 2009:''' Preliminary program due to ISMB | ||
| + | * '''Thursday, April 2, 2009:''' Preliminary program posted online at ISMB web site | ||
| + | * ''Monday, April 13:'' Abstract deadline | ||
| + | * ''April 13-30, 2009:'' Review period | ||
| + | * ''April 30-May 12, 2009:'' Resolution of disagreements, decisions made | ||
| + | * ''May 13, 2009'': Notification of accepted abstracts | ||
| + | * '''May 15, 2009:''' Early Registration Discount Cut-off date | ||
| + | * '''May 22, 2009:''' Abstracts revised to conform to formatting guidelines received by committee | ||
| + | * '''Monday, June 1, 2009:''' Handout materials (CD and/or printed) due to ISMB | ||
* Deadline for revised papers (for proceedings if we have one) | * Deadline for revised papers (for proceedings if we have one) | ||
| − | * | + | * '''Saturday, June 27 and Sunday, June 28, 2009: BOSC''' |
| − | * | + | * '''June 29 to July 2, 2009''': ISMB main meeting |
| + | |||
| + | |||
| + | NOTE: If we decide to publish a proceedings, we will need to add deadlines for the revision of papers and delivery to the journal either pre- or post-conference. | ||
== Organizing Committee == | == Organizing Committee == | ||
| − | === Co- | + | * We seek volunteers to help with the organization of BOSC 2009. If you wish to join the BOSC 2009 Organizing Committee, please send an e-mail to [mailto:bosc@open-bio.org bosc@open-bio.org]. |
| + | * If you wish to be on the mailing list for BOSC-related announcements, including the call for abstracts and deadline reminders, please subscribe to the [http://lists.open-bio.org/mailman/listinfo/bosc-announce Bosc-announce] list. | ||
| + | |||
| + | === Chair === | ||
| + | |||
| + | * [http://myweb.lmu.edu/kdahlqui Kam D. Dahlquist] (Loyola Marymount University) | ||
| + | ** Oversight of entire conference | ||
| + | |||
| + | === Co-Chair === | ||
| + | |||
| + | * [http://www.ohio.edu/cidds/welch/ Lonnie R. Welch] (Ohio University) | ||
| + | ** Special interest in organizing the sessions on design patterns, regulatory genomics, and grand challenges in the Post-Genomics Era. | ||
| − | + | === Members and Roles === | |
| − | |||
| − | + | * [[bp:Hilmar Lapp|Hilmar Lapp]] (BioPerl, BioSQL, and NESCent) | |
| + | * Jens Lichtenberg (Ohio University) | ||
| + | ** Publications Chair: will be responsible for collecting, organizing, and formatting abstracts, making program (PDF for hard copy), and posting to the BOSC 2009 web site, organizing proceedings | ||
| + | * Frank Drews (Ohio University) | ||
| + | ** Interest in mulitcore and gpgpu computing | ||
| + | * Andrew Dalke (Dalke Scientific, Goteborg, Sweden) | ||
| + | * Jim Procter (University of Dundee, Scotland) | ||
| + | ** Interest in a BOF/hackathon on Visualization | ||
| + | * Anton Nekrutenko (Penn State University) | ||
| + | ** Overlap with Data Management & Analysis SIG | ||
| + | * [http://www.inb.uni-luebeck.de/~moeller/ Steffen Moeller] (Institut für Neuro- und Bioinformatik) | ||
| + | ** Computational grids | ||
| + | === Offers to Help === | ||
| − | + | * Richard Holland | |
| − | ==== | + | <!--==== Publicity Chairs ==== |
| − | * | + | * Need chairs for the geographic regions of North/South America, Europe, Asia |
| − | * | + | * Description: |
| + | ** Draft and send by e-mail conference advertisements and call for papers | ||
| + | ** Manage mailing of promotional/informational materials | ||
| − | ==== | + | ==== Sponsorship Chair ==== |
| − | * Need | + | * Need Sponsorship Chair |
| − | * | + | * Description: |
| − | * | + | ** renew with previous sponsors |
| − | * | + | ** seek new sponsors (industry, academic, government) |
| − | |||
| − | |||
| − | ** | ||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | ==== | + | ==== Finance Chair ==== |
| − | * | + | * Need Finance Chair |
| − | * | + | * Description: handles budget for conference |
| − | ==== | + | ==== Program Chair ==== |
| − | * | + | * Need Program Chair |
| + | * Description: | ||
| + | ** Recruits and manages the Abstract reviewers | ||
| + | ** Recruits Session Chairs for conference--> | ||
| + | == Program == | ||
| − | + | === Keynote speakers === | |
| − | |||
| − | + | * Aim for one main speaker per morning. | |
| + | * Committee, please put suggestions on BOSC Planning GoogleDoc. | ||
| − | + | === Session Topics === | |
| − | |||
| − | + | * Bio* Updates | |
| + | * Open Source Software | ||
| + | * Design Patterns in Bioinformatics | ||
| + | * Regulatory Genomics/Computational Genomics (and hackathon) | ||
| + | * Multicore and GPGPU computing | ||
| + | * Visualization | ||
| + | * Computational Grids | ||
| + | * Data Management & Analysis: Overlapping session with [http://www.dam-sig.org DAM SIG] | ||
| + | * Lightning Talks | ||
| + | * Birds of a Feather | ||
| − | == | + | == Tasks & Action Items == |
| − | + | === Logistics & Planning === | |
| − | + | * Finalize BOSC 2009 web site wording: ''done'' | |
| + | * Put out Call for Abstracts via e-mail (Click [[Media:BOSC2009_CallForAbstracts.txt | here]] to download .txt version of message): | ||
| + | ** Bosc-announce list updated with addresses from BOSC 2008 and Call for Abstracts sent ''[[User:Kdahlquist|Kdahlquist]] 20:41, 24 February 2009 (UTC)'' | ||
| + | ** Added BOSC 2009 organizing committee members to Bosc-announce list; sent call to committee members. | ||
| + | ** Sent Call for Abstracts to Open Bioinformatics Foundation members list. | ||
| + | *** I'm wondering when that list was last updated because I could not find my own name on the list and I've been a member since Summer 2006. ''[[User:Kdahlquist|Kdahlquist]] 21:38, 24 February 2009 (UTC)'' | ||
| − | * | + | === Publicity Ideas === |
| − | * | + | * Update/create E-mail lists |
| + | ** Participant lists from previous BOSC conferences | ||
| + | ** O|B|F projects | ||
| + | ** O|B|F members | ||
| + | ** bioinformatics programs | ||
| + | * Advertising exchange with PLoS | ||
| + | * Poster | ||
Latest revision as of 01:58, 14 May 2009
- This page is being used for discussion of BOSC 2009 planning. Please see the BOSC 2009 Main Page for the official information.
Contents
Important Dates
NOTE: Dates in BOLD are determined by ISMB. Dates in italics are "penciled" in for planning purposes.
- Monday, November 10: Chair posts SIG proposal to Google Site for comment by organizing committee.
- Monday, November 17: SIG proposal comment period closes so proposal can be finalized.
- Wednesday, November 19, 2008: SIG proposals due to ISMB; Proposal uploaded to ISMB as of 3:06PM PST — Kdahlquist 23:06, 19 November 2008 (UTC)
- Tuesday, December 16, 2008: SIG proposal has been accepted by ISMB — Kdahlquist 22:51, 16 December 2008 (UTC)
- Friday, January 16, 2009: SIG summary due to ISMB coordinators, Instance of OCS set up and tested (or Easy Chair)
- February 16, 2009: Registration Opens
- Wednesday, March 4, 2009: Preliminary program due to ISMB
- Thursday, April 2, 2009: Preliminary program posted online at ISMB web site
- Monday, April 13: Abstract deadline
- April 13-30, 2009: Review period
- April 30-May 12, 2009: Resolution of disagreements, decisions made
- May 13, 2009: Notification of accepted abstracts
- May 15, 2009: Early Registration Discount Cut-off date
- May 22, 2009: Abstracts revised to conform to formatting guidelines received by committee
- Monday, June 1, 2009: Handout materials (CD and/or printed) due to ISMB
- Deadline for revised papers (for proceedings if we have one)
- Saturday, June 27 and Sunday, June 28, 2009: BOSC
- June 29 to July 2, 2009: ISMB main meeting
NOTE: If we decide to publish a proceedings, we will need to add deadlines for the revision of papers and delivery to the journal either pre- or post-conference.
Organizing Committee
- We seek volunteers to help with the organization of BOSC 2009. If you wish to join the BOSC 2009 Organizing Committee, please send an e-mail to bosc@open-bio.org.
- If you wish to be on the mailing list for BOSC-related announcements, including the call for abstracts and deadline reminders, please subscribe to the Bosc-announce list.
Chair
- Kam D. Dahlquist (Loyola Marymount University)
- Oversight of entire conference
Co-Chair
- Lonnie R. Welch (Ohio University)
- Special interest in organizing the sessions on design patterns, regulatory genomics, and grand challenges in the Post-Genomics Era.
Members and Roles
- Hilmar Lapp (BioPerl, BioSQL, and NESCent)
- Jens Lichtenberg (Ohio University)
- Publications Chair: will be responsible for collecting, organizing, and formatting abstracts, making program (PDF for hard copy), and posting to the BOSC 2009 web site, organizing proceedings
- Frank Drews (Ohio University)
- Interest in mulitcore and gpgpu computing
- Andrew Dalke (Dalke Scientific, Goteborg, Sweden)
- Jim Procter (University of Dundee, Scotland)
- Interest in a BOF/hackathon on Visualization
- Anton Nekrutenko (Penn State University)
- Overlap with Data Management & Analysis SIG
- Steffen Moeller (Institut für Neuro- und Bioinformatik)
- Computational grids
Offers to Help
- Richard Holland
Program
Keynote speakers
- Aim for one main speaker per morning.
- Committee, please put suggestions on BOSC Planning GoogleDoc.
Session Topics
- Bio* Updates
- Open Source Software
- Design Patterns in Bioinformatics
- Regulatory Genomics/Computational Genomics (and hackathon)
- Multicore and GPGPU computing
- Visualization
- Computational Grids
- Data Management & Analysis: Overlapping session with DAM SIG
- Lightning Talks
- Birds of a Feather
Tasks & Action Items
Logistics & Planning
- Finalize BOSC 2009 web site wording: done
- Put out Call for Abstracts via e-mail (Click here to download .txt version of message):
- Bosc-announce list updated with addresses from BOSC 2008 and Call for Abstracts sent Kdahlquist 20:41, 24 February 2009 (UTC)
- Added BOSC 2009 organizing committee members to Bosc-announce list; sent call to committee members.
- Sent Call for Abstracts to Open Bioinformatics Foundation members list.
- I'm wondering when that list was last updated because I could not find my own name on the list and I've been a member since Summer 2006. Kdahlquist 21:38, 24 February 2009 (UTC)
Publicity Ideas
- Update/create E-mail lists
- Participant lists from previous BOSC conferences
- O|B|F projects
- O|B|F members
- bioinformatics programs
- Advertising exchange with PLoS
- Poster
