| Please visit our ***NEW*** OBF/BOSC website: https://www.open-bio.org/ |
-
Difference between revisions of "BOSC 2007 Schedule"
From Open Bioinformatics Foundation
| Line 9: | Line 9: | ||
|- | |- | ||
| 9:00am | | 9:00am | ||
| − | | Keynote Speaker: Carole Goble | + | | Keynote Speaker: Carole Goble [http://www.slideshare.net/dullhunk/the-seven-deadly-sins-of-bioinformatics slides] |
| − | | [[BOSC_2007_Abstracts#.5BOS_Software.5D_The_ONDEX_Data_Integration_Framework | [OS Software] Jan Taubert: The ONDEX Data Integration Framework]] | + | | [[BOSC_2007_Abstracts#.5BOS_Software.5D_The_ONDEX_Data_Integration_Framework | [OS Software] Jan Taubert: The ONDEX Data Integration Framework]] [ http://www.slideshare.net/bosc/the-ondex-data-integration-framework slides] |
|- | |- | ||
| 9:20am | | 9:20am | ||
| Line 18: | Line 18: | ||
| 9:40am | | 9:40am | ||
| | | | ||
| − | | [[BOSC_2007_Abstracts#.5BOS_Software.5D_Modware:_An_Object-Oriented_Perl_Interface_to_the_Chado_Schema | [OS Software] Eric Just: Modware: An Object-Oriented Perl Interface to the Chado Schema]] | + | | [[BOSC_2007_Abstracts#.5BOS_Software.5D_Modware:_An_Object-Oriented_Perl_Interface_to_the_Chado_Schema | [OS Software] Eric Just: Modware: An Object-Oriented Perl Interface to the Chado Schema]] [http://www.slideshare.net/bosc/modware slides] |
|- | |- | ||
| 10:00 | | 10:00 | ||
| − | | [[BOSC_2007_Abstracts#.5BNew_Technology.5D_The_Galaxy_Framework_for_Computational_Biology_Tool_Integration | [New Technology] James Taylor: The Galaxy Framework for Computational Biology Tool Integration]] | + | | [[BOSC_2007_Abstracts#.5BNew_Technology.5D_The_Galaxy_Framework_for_Computational_Biology_Tool_Integration | [New Technology] James Taylor: The Galaxy Framework for Computational Biology Tool Integration]] [http://www.slideshare.net/bosc/galaxy slides] |
| [[BOSC_2007_Abstracts#.5BOS_Software.5D_XRATE:_Scheme-y_trees.2C_phylo-HMMs_and_phylo-grammars | [OS Software] Ian Holmes: XRATE: Scheme-y trees, phylo-HMMs and phylo-grammars]] | | [[BOSC_2007_Abstracts#.5BOS_Software.5D_XRATE:_Scheme-y_trees.2C_phylo-HMMs_and_phylo-grammars | [OS Software] Ian Holmes: XRATE: Scheme-y trees, phylo-HMMs and phylo-grammars]] | ||
|- | |- | ||
| 10:20 | | 10:20 | ||
| − | | [[BOSC_2007_Abstracts#.5BNew_Technology.5D_AJAX_GBrowse:_Community_Genome_Annotation_Made_Easy | [New Technology] Mitch Skinner: AJAX GBrowse: Community Genome Annotation Made Easy]] | + | | [[BOSC_2007_Abstracts#.5BNew_Technology.5D_AJAX_GBrowse:_Community_Genome_Annotation_Made_Easy | [New Technology] Mitch Skinner: AJAX GBrowse: Community Genome Annotation Made Easy]] [http://genome.biowiki.org/info/BOSC_2007/slides.html slides] |
| [[BOSC_2007_Abstracts#.5BOS_Software.5D_E-Cell_3D:_3-Dimensional_Visualization_Front-End_for_E-Cell_Simulation_Environment | [OS Software] Kazuharu Arakawa: E-Cell 3D: 3-Dimensional Visualization Front-End for E-Cell Simulation Environment]] | | [[BOSC_2007_Abstracts#.5BOS_Software.5D_E-Cell_3D:_3-Dimensional_Visualization_Front-End_for_E-Cell_Simulation_Environment | [OS Software] Kazuharu Arakawa: E-Cell 3D: 3-Dimensional Visualization Front-End for E-Cell Simulation Environment]] | ||
|- | |- | ||
| Line 33: | Line 33: | ||
|- | |- | ||
| 11:00am | | 11:00am | ||
| − | | [[BOSC_2007_Abstracts#.5BNew_Technology.5D_Dasty2:_A_Web_Client_for_Visualizing_Protein_Sequence_Features | [New Technology] Rafael C. Jimenez: Dasty2: A Web Client for Visualizing Protein Sequence Features]] | + | | [[BOSC_2007_Abstracts#.5BNew_Technology.5D_Dasty2:_A_Web_Client_for_Visualizing_Protein_Sequence_Features | [New Technology] Rafael C. Jimenez: Dasty2: A Web Client for Visualizing Protein Sequence Features]] [http://www.slideshare.net/bosc/dastyt2 slides] |
| − | | [[BOSC_2007_Abstracts#.5BOS_Software.5D_XMLPipeDB:_A_Reusable.2C_Open_Source_Tool_Chain_for_Building_Relational_Databases_from_XML_Sources | [OS Software] Kam Dahlquist: XMLPipeDB: A Reusable, Open Source Tool Chain for Building Relational Databases from XML Sources]] | + | | [[BOSC_2007_Abstracts#.5BOS_Software.5D_XMLPipeDB:_A_Reusable.2C_Open_Source_Tool_Chain_for_Building_Relational_Databases_from_XML_Sources | [OS Software] Kam Dahlquist: XMLPipeDB: A Reusable, Open Source Tool Chain for Building Relational Databases from XML Sources]] [http://www.slideshare.net/bosc/xmlpipedb slides] |
|- | |- | ||
| 11:20am | | 11:20am | ||
| − | | [[BOSC_2007_Abstracts#.5BNew_Technology.5D_EMBRACE_Web_Services | [New Technology] Taavi Hupponen: EMBRACE Web Services]] | + | | [[BOSC_2007_Abstracts#.5BNew_Technology.5D_EMBRACE_Web_Services | [New Technology] Taavi Hupponen: EMBRACE Web Services]] [http://www.slideshare.net/bosc/embrace-web-services slides] |
| − | | [[BOSC_2007_Abstracts#.5BSoftware_Design_And_Engineering.5D_An_Open_Source_Framework_for_Teaching_Bioinformatics | [Software Design And Engineering] Kam Dahlquist: An Open Source Framework for Teaching Bioinformatics]] | + | | [[BOSC_2007_Abstracts#.5BSoftware_Design_And_Engineering.5D_An_Open_Source_Framework_for_Teaching_Bioinformatics | [Software Design And Engineering] Kam Dahlquist: An Open Source Framework for Teaching Bioinformatics]] [http://www.slideshare.net/bosc/an-open-source-framework-for-teaching-bioinformatics slides] |
|- | |- | ||
| 11:40 | | 11:40 | ||
| − | | [[BOSC_2007_Abstracts#.5BNew_Technology.5D_CaGrid_Cancer_Biomedical_Informatics_Grid | [New Technology] Krishnakant Shanbhag: CaGrid Cancer Biomedical Informatics Grid]] | + | | [[BOSC_2007_Abstracts#.5BNew_Technology.5D_CaGrid_Cancer_Biomedical_Informatics_Grid | [New Technology] Krishnakant Shanbhag: CaGrid Cancer Biomedical Informatics Grid]] [http://www.slideshare.net/bosc/cagrid-10-service-infrastructure slides] |
| − | | [[BOSC_2007_Abstracts#.5BSoftware_Design_And_Engineering.5D_Tools_to_Facilitate_Large_Scale_Comparative_Genomic_Analysis | [Software Design And Engineering] James Taylor: Tools to Facilitate Large Scale Comparative Genomic Analysis]] | + | | [[BOSC_2007_Abstracts#.5BSoftware_Design_And_Engineering.5D_Tools_to_Facilitate_Large_Scale_Comparative_Genomic_Analysis | [Software Design And Engineering] James Taylor: Tools to Facilitate Large Scale Comparative Genomic Analysis]] http://www.slideshare.net/bosc/software-engineering slides] |
|- | |- | ||
| 11:50 | | 11:50 | ||
| Line 58: | Line 58: | ||
| 1:45pm | | 1:45pm | ||
| Tom Oinn: MyGrid/Taverna Project Update | | Tom Oinn: MyGrid/Taverna Project Update | ||
| − | | [Lightning Talk] Toshiaki Katayama -- Introduction of the Japanese Open Bio* community | + | | [Lightning Talk] Toshiaki Katayama -- Introduction of the Japanese Open Bio* community [http://open-bio.jp/archive/20070720_BOSC/BOSC2007-OBJ.pdf slides] |
|- | |- | ||
| 2:00pm | | 2:00pm | ||
| Line 65: | Line 65: | ||
|- | |- | ||
| 2:15pm | | 2:15pm | ||
| − | | Arek Kasprzyk: BioMart Project Update | + | | Arek Kasprzyk: BioMart Project Update [http://www.slideshare.net/bosc/biomart-update slides] |
| [Lightning Talk] Henrik Abelsson: Mitrion-C Accellerated NCBI Blast Application | | [Lightning Talk] Henrik Abelsson: Mitrion-C Accellerated NCBI Blast Application | ||
|- | |- | ||
| 2:30pm | | 2:30pm | ||
| − | | Peter Cock: BioPython Project Update | + | | Peter Cock: BioPython Project Update [http://www.slideshare.net/bosc/biopython slides] |
| [Lightning Talk] Shawn Houston: The Compute Portal Project | | [Lightning Talk] Shawn Houston: The Compute Portal Project | ||
|- | |- | ||
| 2:45 | | 2:45 | ||
| − | | Toshiaki Katayama: BioRuby Project Update | + | | Toshiaki Katayama: BioRuby Project Update [http://bioruby.org/archive/doc/BR070719-bosc.pdf slides] |
| [[BOSC_2007_Wifi_Workshops | Interactive Wifi Workshops]] | | [[BOSC_2007_Wifi_Workshops | Interactive Wifi Workshops]] | ||
|- | |- | ||
| 3:00pm | | 3:00pm | ||
| − | | Jason Stajich: BioPerl Project Update | + | | Jason Stajich: BioPerl Project Update [http://www.slideshare.net/bosc/bioperl-project-update slides] |
| [[BOSC_2007_Wifi_Workshops | Interactive Wifi Workshops]] | | [[BOSC_2007_Wifi_Workshops | Interactive Wifi Workshops]] | ||
|- | |- | ||
