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Google Summer of Code 2014 Ideas

From Open Bioinformatics Foundation

Revision as of 16:26, 14 February 2014 by EricTalevich (talk) (Added project contact info, reformatted as subsections)

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Interested mentors and students should subscribe to the OBF/GSoC mailing list and announce their interest - that is the way we can track what is happening.

Mentor names and project ideas are hosted on each member project's wiki on a dedicated Google Summer of Code page. See each of the member projects, linked below, for more details about any project:

1 Cross-project ideas
- 1.1 BioInterchange: Convert and Exchange Biological File Formants using RESTful web service
- 1.2 Native and JVM-based support for the Systems Biology Markup Language (SMBL)
2 BioPerl
3 BioPython
- 3.1 Indexing & Lazy-loading Sequence Parsers
4 BioRuby
- 4.1 An ultra-fast scalable RESTful API to query large numbers of genomic variations
5 BioHaskell
- 5.1 Optimizing a novel, very sensitive alignment method

Cross-project ideas

BioInterchange: Convert and Exchange Biological File Formants using RESTful web service

Native and JVM-based support for the Systems Biology Markup Language (SMBL)

BioPerl

BioPerl GSoC Page - project ideas and mentors
Project website
Information for new developers
source code browser for bioperl-live (the main BioPerl code base), and all BioPerl sub-projects
Priority list of things that need work, as another source for student-conceived project ideas
Mailing lists
IRC: #bioperl on Freenode