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Difference between revisions of "BOSC 2014 Schedule"

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(BOSC Day 2: Saturday 12 July 2014)
(BOSC Day 1: Friday 11 July 2014)
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| ''Session: Genome-scale Data and Beyond''
 
| ''Session: Genome-scale Data and Beyond''
 
| Chair: Chris Fields
 
| Chair: Chris Fields
 +
|--
 +
| 10:45
 +
| [Genome-Scale] ADAM: Fast, Scalable Genomic Analysis
 +
| Frank Austin Nothaft
 +
|-
 +
| 11:05
 +
| [Genome-Scale] A framework for benchmarking RNA-seq pipelines
 +
| Rory Kirchner
 +
|-
 +
| 11:25
 +
| [Genome-Scale] New Frontiers of Genome Assembly with SPAdes 3.1
 +
| Andrey Prjibelski
 +
|-
 +
| 11:45
 +
| [Genome-Scale] SigSeeker: An Ensemble for Analysis of Epigenetic Data
 +
| Jens Lichtenberg
 +
|-
 +
| 12:05
 +
| [Genome-Scale] Pathview: an R/Bioconductor package for pathway-based data integration and visualization
 +
| Weijun Luo
 
|-
 
|-
 
| '''12:30-1:30'''
 
| '''12:30-1:30'''
 
| '''Lunch'''
 
| '''Lunch'''
| (And posters)
+
| (And Posters)
 
|-
 
|-
 
| 1:00-2:00
 
| 1:00-2:00
 
| '''Poster Session and Birds of a Feather'''
 
| '''Poster Session and Birds of a Feather'''
| (Overlapping with Lunch)
+
| (Overlapping with lunch)
 
|-
 
|-
 
| 14:00-15:30
 
| 14:00-15:30

Revision as of 05:57, 25 May 2014

BOSC logo

This is a working draft. Once finalised, you will also be able to:

- Download schedule as PDF

- Download the complete program.

Pre-BOSC Codefest: July 9-10, 2014

See Codefest 2014 for details.

BOSC

BOSC Day 1: Friday 11 July 2014

Time Topic Speaker, Moderator, or notes
7:30-9:00 Registration Early arrival is recommended as there are usually long lines
9:00-9:15 Introduction and welcome Nomi Harris and/or Peter Cock (Chairs, BOSC 2014)
9:15-10:15 Keynote: A History of Bioinformatics (in the year 2039) C. Titus Brown
10:15-10:45 Coffee Break
10:45-12:30 Session: Genome-scale Data and Beyond Chair: Chris Fields
10:45 [Genome-Scale] ADAM: Fast, Scalable Genomic Analysis Frank Austin Nothaft
11:05 [Genome-Scale] A framework for benchmarking RNA-seq pipelines Rory Kirchner
11:25 [Genome-Scale] New Frontiers of Genome Assembly with SPAdes 3.1 Andrey Prjibelski
11:45 [Genome-Scale] SigSeeker: An Ensemble for Analysis of Epigenetic Data Jens Lichtenberg
12:05 [Genome-Scale] Pathview: an R/Bioconductor package for pathway-based data integration and visualization Weijun Luo
12:30-1:30 Lunch (And Posters)
1:00-2:00 Poster Session and Birds of a Feather (Overlapping with lunch)
14:00-15:30 Session: Visualization Chair: Rob Davey
15:30-16:00 Coffee Break
16:00-17:00 Session: Bioinformatics Open Source Project Updates Chair: Peter Cock
17:00-18:00 Lightning Talks followed by BOFs Suggest a BOF topic here!
19:00 Pay-your-own-way BOSC dinner


BOSC logo

BOSC Day 2: Saturday 12 July 2014

Time Topic Speaker or Moderator
8:45 - 8:50 Announcements Peter Cock and/or Nomi Harris (Chairs, BOSC 2014)
8:50 - 9:00 Codefest 2014 Report Brad Chapman
9:00 - 9:15 Open Bioinformatics Foundation (OBF) update Hilmar Lapp (President, Open Bioinformatics Foundation)
9:15 - 10:15 Keynote: Biomedical Research as an Open Digital Enterprise Philip Bourne
10:15-10:45 Coffee Break
10:45-12:30 Session: Open Science and Reproducible Research Chair: Hilmar Lapp
12:30-13:30 Lunch (and posters)
12:30-13:30 Poster Session (Overlapping with Lunch)
13:30-15:30 Session: Software Interoperability Chair: Raoul Bonnal
15:30-16:00 Coffee Break
16:00-16:15 Session: Software Interoperability (continued) Chair: Raoul Bonnal
16:15-17:05 Panel: Reproducibility: Rewards and Challenges Moderator: Brad Chapman; Panelists: Phil Bourne, Titus Brown, Varsha Khodiyar, Kay Thaney
17:05-17:15 Presentation of Student Travel Awards Peter Cock and/or Nomi Harris (Chairs, BOSC 2014)
17:20-18:00 BOFs Suggest a BOF topic here!

Note the ISMB reception starts at 17:30...


Posters

Shared links to presented posters will be posted here:

Title Presenter
... A.N. Other et al.



Return to BOSC 2014 main page