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Difference between revisions of "Google Summer of Code 2014"

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(Loris Cro: Linked to source code on GitHub)
(2014 Student Projects: Linked Victor's blog; sorted students by last name)
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== 2014 Student Projects ==
 
== 2014 Student Projects ==
 
=== Evan Parker ===
 
 
Mentored by Wibowo Arindrarto and Peter Cock (BioPython)
 
 
* Blog: [http://evanaparker.com/ Biopython Addition of a Lazy Loading Sequence Parser to Biopython’s SeqIO Package]
 
* Source code: https://github.com/eparker05/biopython/tree/lazy-load
 
  
 
=== Sarah Berkemer ===
 
=== Sarah Berkemer ===
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Mentored by Christian Höner zu Siederdissen and Ketil Malde (BioHaskell)
 
Mentored by Christian Höner zu Siederdissen and Ketil Malde (BioHaskell)
  
* Blog: [http://biohaskell.org/GSoC_blog High-performance Transalign algorithm in Haskell]
+
* Project: "High-performance Transalign algorithm in Haskell"
 
+
* Blog: http://biohaskell.org/GSoC_blog
=== Leandro Watanabe ===
 
 
 
:[http://lhwatanabe.blogspot.com Dynamic Modeling of Cellular Populations via arrays in JSBML]
 
:mentored by Nicolas Rodriguez and Chris Myers (JSBML)
 
  
 
=== Loris Cro ===
 
=== Loris Cro ===
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Mentored by Francesco Strozzi and Raoul Bonnal (BioRuby)
 
Mentored by Francesco Strozzi and Raoul Bonnal (BioRuby)
  
* Blog: [http://kappaloris.github.io/GSoC-2014-OBF/ An ultra-fast scalable RESTful API to query large numbers of VCF datapoints]
+
* Project: "An ultra-fast scalable RESTful API to query large numbers of VCF datapoints"
 +
* Blog: http://kappaloris.github.io/GSoC-2014-OBF/
 
* Source code: https://github.com/kappaloris/GSoC-2014-OBF
 
* Source code: https://github.com/kappaloris/GSoC-2014-OBF
  
 
=== Victor Kofia ===
 
=== Victor Kofia ===
  
:Redesign the implementation of mathematical formulas in JSBML
+
Mentored by Alex Thomas and Sarah Keating (JSBML)
:mentored by Alex Thomas and Sarah Keating (JSBML)
+
 
 +
* Project: "Redesign the implementation of mathematical formulas in JSBML"
 +
* Blog: http://kofiav.blogspot.ca/
 +
 
 +
=== Evan Parker ===
 +
 
 +
Mentored by Wibowo Arindrarto and Peter Cock (BioPython)
 +
 
 +
* Project: "Addition of a lazy-loading sequence parser to Biopython’s SeqIO package"
 +
* Blog: http://evanaparker.com/
 +
* Source code: https://github.com/eparker05/biopython/tree/lazy-load
  
 
=== Ibrahim Vazirabad ===
 
=== Ibrahim Vazirabad ===
  
:Improving the Plug-in interface for CellDesigner  
+
Mentored by Andreas Dräger (JSBML)
:mentored by Andreas Dräger (JSBML)
+
 
 +
* Project: "Improving the Plug-in interface for CellDesigner"
 +
 
 +
=== Leandro Watanabe ===
 +
 
 +
Mentored by Nicolas Rodriguez and Chris Myers (JSBML)
 +
 
 +
* Project: "Dynamic Modeling of Cellular Populations via arrays in JSBML"
 +
* Blog: http://lhwatanabe.blogspot.com

Revision as of 21:14, 26 May 2014

GSoC 2014

The Open Bioinformatics Foundation has been accepted as a mentoring organization for Google Summer of Code 2014, with 6 student projects funded!

2014 Student Projects

Sarah Berkemer

Mentored by Christian Höner zu Siederdissen and Ketil Malde (BioHaskell)

Loris Cro

Mentored by Francesco Strozzi and Raoul Bonnal (BioRuby)

Victor Kofia

Mentored by Alex Thomas and Sarah Keating (JSBML)

Evan Parker

Mentored by Wibowo Arindrarto and Peter Cock (BioPython)

Ibrahim Vazirabad

Mentored by Andreas Dräger (JSBML)

  • Project: "Improving the Plug-in interface for CellDesigner"

Leandro Watanabe

Mentored by Nicolas Rodriguez and Chris Myers (JSBML)